LegumeIP V3: From Models to Crops - An Integrative Gene Discovery Platform for Translational Genomics in Legumes

  • [V. angularis (transcript)]
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Selected organism and genome annotation version

SpeciesVigna angularis (red mung bean, azuki bean, adzuki bean)
GenotypeGyeongwon IT213134
Genome annotation Va
DescriptionVigna Angularis, Seoul National Univ, Gyeongwon.gnm3.JyYC
# of genomic sequences 929
# of genes 26,857
# of transcripts 36,689
RNA-seq experiments / conditions / samples 2 / 3 / 4
Choose sequence type for expression analysis 26,857 genes       or       36,689 transcripts

Expression Profile

Normalize and compare gene expression level; Visualize gene expression level; Search genes by specified keywords, Coordinates and expression pattern
Start from choosing samples


Search co-expressed genes; Build co-expressed gene modules
Start from choosing samples

Differential Expression

Identify differentially expressed genes between two conditions/treatments
Choosing conditions

Pathway Enrichment Analysis

Identify possible function of gene group from your input or DE analysis
Gene Ontology analysis
KEGG pathway analysis

Homolog mapping

Mapping gene/transcript/CDS/protein to its correspondence in other genomes referring to their functional annotation, such as homolog or panther family ID
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