To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of Znf-LSD family

  Znf-LSD
Family Type Transcription factor
Plant Specific Yes
Functional Domains DNA binding domain/Protein-Protein interacting domain
Must-have InterProScan Domain Pattern IPR005735
Prohibited InterProScan Domain Pattern IPR007087 IPR015880 IPR000315
Description

This is a plant specific transcription factor. It has a unique finger domain, defined by CxxCxRxxLMYxxGASxVxC motif. This domain is responsible for are involved in interacting with other proteins as well as DNA binding.

Reference:

1. R. A. Dietrich, M. H. Richberg, R. Schmidt, C. Dean, J. L. Dangl, A novel zinc finger protein is encoded by the Arabidopsis LSD1 gene and functions as a negative regulator of plant cell death. Cell 88, 685 (1997).

Cross-reference to other databases

The family is the synonymous family of LSD in PlantTFDB.



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