To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of TUBBY family

  TUBBY
Family Type Transcription factor
Plant Specific No
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR000007 or IPR005398
Prohibited InterProScan Domain Pattern -
Description

Tubby family defines a new class of DNA binding proteins. Tubby-like proteins are act as bipartite transcription regulators that bind double-stranded DNA through COOH-terminal DNA binding domains and have transcription modulation segments at their NH2-termini.

Reference:

1. Boggon, T.J., Shan, W.S., Santagata, S., Myers, S.C., and Shapiro, L. (1999). Implication of tubby proteins as transcription factors by structure-based functional analysis. Science 286, 2119-2125.

Cross-reference to other databases

The family is the synonymous family of TUB in PlnTFDB.



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