To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of NOZZLE family

  NOZZLE
Family Type Transcription factor
Plant Specific Yes
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR014855
Prohibited InterProScan Domain Pattern -
Description

NOZZLE encodes a novel protein related to MADS box transcription factors. SPL is the first describe Nozzle gene encodes a putative transcription factor, and has been implicated in ovule pattern formation and early microsporogenesis. 17 amino acid predicted helix region of the SPL gene product (amino acids 64?C80) is homologous to the first helix of the MADS domain. Furthermore, secondary structure analysis revealed that there is a basic region between residue 41 and 62, followed by two helix regions, 64?C85 and 211?C235. At the carboxy terminal there is a putative Myc-type helix?Cloop?Chelix dimerization domain signature.

Reference:

1. T. Ito, F. Wellmer, H. Yu, P. Das, N. Ito, M. Alves-Ferreira, J. L. Riechmann, E. M. Meyerowitz, The homeotic protein AGAMOUS controls microsporogenesis by regulation of SPOROCYTELESS. Nature 430, 356 (2004)

Cross-reference to other databases

The family is the synonymous family of NZZ/SPL in PlantTFDB.



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