To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of MYB-related family

  MYB-related
Family Type Transcription factor
Plant Specific No
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR006447
Prohibited InterProScan Domain Pattern IPR009057 IPR001606 IPR001789 IPR000330 IPR017053
Description

The MYB (myeloblastosis) transcription factor family is present in all eukaryotes. MYB DNA-binding domain, contains ~52 amino acid residues in length and forms a helix-turn-helix fold with three regularly spaced tryptophan residues. Based on the number of adjacent MYB repeats, MYB transcription factors are classified into four major groups, namely 1R-MYB, 2R-MYB, 3R-MYB and 4R-MYB containing one, two, three and four MYB repeats, respectively. In animals, R1R2R3- type MYB domain proteins are predominant, while in plants, the R2R3-type
MYB-related genes are those transcription factors they have only one MYB domain. MYB domain proteins are more prevalent.

Reference:

1. C. Martin, J. Paz-Ares, MYB transcription factors in plants. Trends Genet 13, 67 (1997) 2. A. Katiyar, S. Smita, S. K. Lenka, R. Rajwanshi, V. Chinnusamy, K. C. Bansal, Genome-wide classification and expression analysis of MYB transcription factor families in rice and Arabidopsis. BMC Genomics 13, 544 (2012).

Cross-reference to other databases

The family is the same family of MYB_related in PlantTFDB.

The family is the same family of MYB-related in PlnTFDB.



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