To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of JmjN family

  JmjN
Family Type Transcription factor & chromatin remodeling
Plant Specific No
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR003349
Prohibited InterProScan Domain Pattern IPR001606 IPR009071
Description

In many diverse species including bacteria, fungi, plants, and animals, contains jumanji protein family. Although the biochemical activities of JmjN proteins are yet to be shown, but they are usually associated with chromatin remodeler. In Arabidopsis mutantion in jmj group of proteins leads to Flowering Time defects in Arabidopsis.

Reference:

1. Plant Signal Behav 6, 810 (2011) 2. T. Takeuchi, Y. Watanabe, T. Takano-Shimizu, S. Kondo, Roles of jumonji and jumonji family genes in chromatin regulation and development. Dev Dyn 235, 2449 (2006).

2. B. Noh, S. H. Lee, H. J. Kim, G. Yi, E. A. Shin, M. Lee, K. J. Jung, M. R. Doyle, R. M. Amasino, Y. S. Noh, Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time. Plant Cell 16, 2601 (2004)

Cross-reference to other databases

The family is the subfamily family of Jumonji in PlnTFDB.



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