To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of GAGA-Binding-like family

  GAGA-Binding-like
Family Type Transcription factor
Plant Specific No
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR010409
Prohibited InterProScan Domain Pattern -
Description

GAGA-motif binding transcription factors are present in diverse Eukaryotic species, including plants. In in vitro system it has been shown that it binds to DNA directly.

Reference:

1. D. Wanke, M. L. Hohenstatt, M. Dynowski, U. Bloss, A. Hecker, K. Elgass, S. Hummel, A. Hahn, K. Caesar, F. Schleifenbaum, K. Harter, K. W. Berendzen, Alanine zipper-like coiled-coil domains are necessary for homotypic dimerization of plant GAGA-factors in the nucleus and nucleolus. PLoS One 6, e16070 (2011)

Cross-reference to other databases

The family is the synonymous family of BBR/BPC in PlantTFDB.

The family is the synonymous family of BBR/BPC in PlnTFDB.



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