To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of DDT family

  DDT
Family Type Transcription factor & chromatin remodeling
Plant Specific No
Functional Domains Putative DNA binding domain
Must-have InterProScan Domain Pattern IPR004022 or IPR018501 or IPR018500
Prohibited InterProScan Domain Pattern IPR001487 IPR018359
Description

DDT (Different transcription and chromosome remodeling factors) domain contains a putative DNA binding domain found in a variety of chromatin remodeling factors. This domain is characterized by a number of conserved aromatic and charged residues and is predicted to consist of three ?? helices.

Reference:

1. Doerks T, Copley R, Bork P (2001) DDT ?C a novel domain in different transcription and chromosome remodeling factors. Trends Biochem Sci 26:145?C146.

Cross-reference to other databases

The family is the same family of DDT in PlnTFDB.



  © 2011-2013 by The Samuel Roberts Noble Foundation, Inc.; Designed for 1024x768 resolution