To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of AS2-LOB family

  AS2-LOB
Family Type Transcription factor
Plant Specific Yes
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR004883 or IPR017414
Prohibited InterProScan Domain Pattern -
Description

The AS2/LOB genes encode plant-specific nuclear proteins containing the conserved domain AS2/LOB. There group of proteins can be subdivided into two classes, class I proteins include an N-terminal conserved domain with a CX2CX6CX3C motif and a zipper-like sequence, whereas class II proteins include the C-motif and an incomplete zipper-like sequence . This group of Transcription factor recognizes a 6-bp consensus DNA motif, GCGGCG.

Reference:

1. S. B. Sun, J. P. Song, L. S. Meng, ASYMMETRIC LEAVES2 gene, a member of LOB/AS2 family of Arabidopsis thaliana, causes an abaxializing leaves in transgenic cockscomb. Mol Biol Rep 39, 4927 (2012)

Cross-reference to other databases

The family is the synonymous family of LBD in PlantTFDB.

The family is the synonymous family of LOB in PlnTFDB.



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