To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of ARID family

  ARID
Family Type Transcription factor & chromatin remodeling
Plant Specific No
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern IPR001606
Prohibited InterProScan Domain Pattern IPR003347 IPR003349 IPR004198 IPR009071
Description

The ARID (AT-rich interaction domain) is an ancient DNA-binding domain that has been identified in all sequenced higher eukaryotic genomes, including plant. The ARID consensus contains ~100 amino acid residues.

Reference:

1. D. Wilsker, L. Probst, H. M. Wain, L. Maltais, P. W. Tucker, E. Moran, Nomenclature of the ARID family of DNA-binding proteins. Genomics 86, 242 (2005)

Cross-reference to other databases

The family is the same family of ARID in PlnTFDB.



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