To support the continuous development of PlantTFcat, please cite: Xinbin Dai, Senjuti Sinharoy, Michael K. Udvardi and Patrick X. Zhao, PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool, BMC Bioinformatics, 2013, 14:321, doi:10.1186/1471-2105-14-321.
The Zhao Bioinformatics Laboratory
PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool   
  About Analysis Family Help
Location:  Details of ARF family

  ARF
Family Type Transcription factor
Plant Specific Yes
Functional Domains DNA binding domain
Must-have InterProScan Domain Pattern (IPR010525 or IPR011525) and IPR003340
Prohibited InterProScan Domain Pattern -
Description

ARF proteins contain the B3 DNA domain. Most ARF proteins contain two additional C-terminal domains, called domain III and domain IV, which is also present in Aux-IAA proteins. This III and IV domain act as a protein-protein interacting domain which interacts either with Aux-IAA or with ARF.

Reference:

1. K. Swaminathan, K. Peterson, T. Jack, The plant B3 superfamily. Trends Plant Sci 13, 647 (2008)

Cross-reference to other databases

The family is the same family of ARF in PlantTFDB.

The family is the same family of ARF in PlnTFDB.



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